BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027C02SP1|AL428686
(857 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1556 1450 0.0
>3x_Contig1556
Length = 10874
Score = 1450 bits (721), Expect = 0.0
Identities = 815/858 (94%), Gaps = 1/858 (0%)
Strand = Plus / Plus
Query: 1 ttgaanctatcaattataaattaacatacacacacatattataagagaacagaatgattt 60
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4175 ttgaaactatcaattttaaattaacatacacacacatattataagagaacagaatgattt 4234
Query: 61 cctctattactgcttacttggaagaattaaaggatgctttcgtgccaactgtggccaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4235 cctctattactgcttacttggaagaattaaaggatgctttcgtgccaactgtggccaagg 4294
Query: 121 ctgaagacgacgttgaagaagatgaagaagaggaagaagatgacgaagatgaagacgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4295 ctgaagacgacgttgaagaagatgaagaagaggaagaagatgacgaagatgaagacgatg 4354
Query: 181 aagatgaagaagaagaacaaggtgatcaattagatgctttgagagaagaatgthaatcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4355 aagatgaagaagaagaacaaggtgatcaattagatgctttgagagaagaatgtaaatcta 4414
Query: 241 ccgaagaaggtaagcacttggttcatcattatctggvatgtgtcgamagagttcaamagg 300
|||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||
Sbjct: 4415 ccgaagaaggtaagcacttggttcatcattatctggaatgtgtcgaaagagttcaaaagg 4474
Query: 301 cacaagaagaaccaggctatgaagatttggcatacmaggaggactgtgtggmagahttct 360
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||
Sbjct: 4475 cacaagaagaaccaggctatgaagatttggcatacaaggaggactgtgtggaagaattct 4534
Query: 361 tccacttggcacatttcgtggatgamtgcgctgctccamaactgttcgattacttgacat 420
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||
Sbjct: 4535 tccacttggcacatttcgtggatgaatgcgctgctccaaaactgttcgattacttgaaat 4594
Query: 421 hccagagatatcccatttcatcaatatmmctgccaat-gacaaggagagttcatattcta 479
|||||||||||||||||||||||| ||| ||| || |||||||||||||||||||
Sbjct: 4595 aaaagagatatcccatttcatcaatataaatgcaaatggaaaaggagagttcatattcta 4654
Query: 480 cttttttctaacctttatttcagtcctgttcaammcmtcaaccgttatacttaacacata 539
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4655 cttttttctaacctttatttcagtcctgttcaaaaaatcaaccgttatacttaacacata 4714
Query: 540 tttcmccattcaatctctaacagcctttcacagcgaaacagatgtttcagcttatcgtaa 599
|||| |||||||||||||| || ||| | ||||||| |||||||||||||||||||||
Sbjct: 4715 tttcaacattcaatctctaaaagaatttaaaagcgaaaaagatgtttcagcttatcgtaa 4774
Query: 600 tcacctaaggttcccccttgccatttgaggaaatccgtmgagttttcttttccattcccc 659
||||||||||||||||||||| |||||||||||| || ||||||||||||| |||||
Sbjct: 4775 tcacctaaggttcccccttgcaatttgaggaaataagtagagttttcttttcaattccaa 4834
Query: 660 accaccacacaatccatcccatactattatgawttattgacttagaaacacaataaactt 719
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4835 acaaccacacaatccatcccatactattatgaattattgacttagaaacacaataaactt 4894
Query: 720 aaaatttaaaaataagaaacaaaaaagtgaaggaatcacagatcgaagggtatctggaat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4895 aaaatttaaaaataagaaacaaaaaagtgaaggaatcacagatcgaagggtatctggaat 4954
Query: 780 caatttgaagaactgtaccaaaaaaattcagaagaagagactactccactaccattattt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4955 caatttgaagaactgtaccaaaaaaattcagaagaagagactactccactaccattattt 5014
Query: 840 tattattattattatwat 857
||||||||||||||| ||
Sbjct: 5015 tattattattattattat 5032
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,759
Number of Sequences: 1807
Number of extensions: 10759
Number of successful extensions: 1102
Number of sequences better than 1.0e-20: 1
length of query: 857
length of database: 10,358,551
effective HSP length: 16
effective length of query: 841
effective length of database: 10,329,639
effective search space: 8687226399
effective search space used: 8687226399
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)